The Landscape of Viral Expression and Host Gene Fusion and Adaptation in Human Cancer
 Online Supplementary Resource
About | Results | Larsson lab

Library statistics

Sequence libraries:196
Unique samples:194
Unique tumors:194
Unique normals:0
Unique patients:194
Reads per sample (mean):26 million
Total reads:5069 million
Assembled contigs (>400 nt):3697

Longest contig-to-virus alignments (italic = <95% identity)

Tumor sample(hover/click for info)
Normal sample

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Acanthamoeba polyphaga mimivirus 506
Acanthocystis turfacea Chlorella virus 1 356 542 542
Assembled genome 1: Coxsackie-like virus 1385
Assembled genome 2: Mosaic-like virus 1466
Avian myelocytomatosis virus 343 377 335 487 487
Bathycoccus sp. RCC1105 virus BpV1 350 390 414 676 354 208 221 511 767 297 276
Bovine herpesvirus 4 516
Cafeteria roenbergensis virus BV-PW1 260 245 410 514 376
Cyprinid herpesvirus 1 213 215 243
Ectromelia virus 333
Emiliania huxleyi virus 86 372 341 641 341 203 373 341 341 345 250
Helicoverpa zea nudivirus 2 302
Human herpesvirus 5 411 1105
Human herpesvirus 7 486
Megavirus chiliensis 467 467 282 392 256 467 246 537 442 328 424
Micromonas sp. RCC1109 virus MpV1 386
Molluscum contagiosum virus subtype 1 340 325 407 337 459 365 302
Murine osteosarcoma virus 408 205
Murine type C retrovirus 2043
Saimiriine herpesvirus 2 238



Inquiries can be addressed to erik.larsson@gu.se