The Landscape of Viral Expression and Host Gene Fusion and Adaptation in Human Cancer
 Online Supplementary Resource
About | Results | Larsson lab

Library statistics

Sequence libraries:249
Unique samples:249
Unique tumors:249
Unique normals:0
Unique patients:247
Reads per sample (mean):169 million
Total reads screened:42019 million
Total viral alignments:4642

Viral hits in ppm (parts-per-million) of total library reads

Tumor sample(hover for info)
Normal sample

01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06
Sweet potato feathery mottle virus 11
Sweet potato virus C 11

Non-normalized read counts

01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06 06
Abelson murine leukemia virus 1 1 1
Acanthamoeba polyphaga mimivirus 2
Alfalfa mosaic virus RNA 1 2
Autographa californica nucleopolyhedrovirus 1 1 1 2 1 2 1 3 2 2 1 1 2 1 1 1 1 1 1 3 2 3 1 2 1 1 1 1 2 2 1 1 1 2 1 1 1 1 1 2 1 2 1 1 1 3 3 1 1 2 1 1 1 1 1 1 2 2 1 2 1 1 1 1 1 1 3 2 2 1 1 3 2 2 1 1 1 1 1 1 3
Bombyx mandarina nucleopolyhedrovirus 1 1 2 1 2 1 1 2 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 1 1
Bombyx mori NPV 1 2 1 2 1 1 1 1 2 1 1 1 2 1 1 1 1 1 1 1 1
Bovine viral diarrhea virus 1 1 1 1 1 1 1 1 1
Brome mosaic virus RNA 1 3 7
Brome mosaic virus RNA 2 1
Brome mosaic virus RNA 3 2
Cucumber mosaic virus RNA 3 2
Friend murine leukemia virus 1
Garlic common latent virus 2
Human herpesvirus 1 1
Human herpesvirus 4 1 27 15 23 2 50 7 2 3 9 4 2 91 2 16 2 2 14 2 6
Human herpesvirus 4 type 1 1 26 15 23 2 50 7 2 5 9 4 2 93 2 16 2 2 14 2 7
Human herpesvirus 5 118 113
Human herpesvirus 6A 6
Human herpesvirus 6B 24
Human papillomavirus type 16 12 2 8 2
Human papillomavirus type 33 9
Macacine herpesvirus 4 3 1 2 3 1 1 4 2 2 1 1
Maruca vitrata MNPV 1 1 1 1 1 1 1
Moloney murine leukemia virus 1 1
Murine osteosarcoma virus 1 1 1 1 1 1 1 1 1 1 2 10 1
Oryza sativa endornavirus 2
Panine herpesvirus 2 1 1
Pestivirus Giraffe-1 1 1 1 1 1 1 1
Plutella xylostella multiple nucleopolyhedrovirus 1 1 1 2 1 2 1 3 2 2 1 1 2 1 1 1 1 1 1 3 2 3 1 2 1 1 1 1 2 2 1 1 1 2 1 1 1 1 1 2 1 2 1 1 1 3 3 1 1 2 1 1 1 1 1 1 2 2 1 1 1 1 1 1 1 3 2 2 1 1 3 2 2 1 1 1 1 1 1 3
Potato virus S 2
PreXMRV-1 provirus 1
Rachiplusia ou MNPV 1 1 1 2 1 2 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 2 1 1 1 1 1 1 1 1 2 1 1 1 2 1 1 1 1 1
Rauscher murine leukemia virus 1
Saccharomyces cerevisiae virus L-BC (La) 2
Shamonda virus segment S 1 1 1 7 1 1 1 1 2 3 2 1 1 5 1 1 3 1 3 2 3 1 2 3 3 2 2 1 1 1 1 1 1 1 1 1 1 2 1 1 3 1 1 2 1 5 1 2 1 1 1 1 1 1 1 1 1 1 1 1
Spleen focus-forming virus 2
Sweet potato feathery mottle virus 1604
Sweet potato virus 2 4
Sweet potato virus C 1616
Sweet potato virus G 9
Tobacco etch virus 2
Tobacco ringspot virus RNA 1 1
Tobacco streak virus RNA 1 1
Woolly monkey sarcoma virus 1 2
Y73 sarcoma virus 1



Inquiries can be addressed to erik.larsson@gu.se