The Landscape of Viral Expression and Host Gene Fusion and Adaptation in Human Cancer
 Online Supplementary Resource
About | Results | Larsson lab

Library statistics

Sequence libraries:169
Unique samples:167
Unique tumors:167
Unique normals:0
Unique patients:161
Reads per sample (mean):135 million
Total reads screened:22833 million
Total viral alignments:635

Viral hits in ppm (parts-per-million) of total library reads

Tumor sample(hover for info)
Normal sample

01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 02 02 02 02 02 02 02 02 02 02 02 02 02

Non-normalized read counts

01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 01 02 02 02 02 02 02 02 02 02 02 02 02 02
Abelson murine leukemia virus 1 1 1 1 1
Alfalfa mosaic virus RNA 1 2
Autographa californica nucleopolyhedrovirus 2 2 2
Bombyx mandarina nucleopolyhedrovirus 1 2 1
Bombyx mori NPV 1 2 1
Bovine viral diarrhea virus 1 1 1 1 1 1 1 1 1 1 2 1 2 1 2 1 1 1 1 2 1 1 1 1 1 1 1 1
Brome mosaic virus RNA 1 2
Brome mosaic virus RNA 2 4
Brome mosaic virus RNA 3 2 2
Clover yellow mosaic virus 1
Culex flavivirus 1
Deformed wing virus 2
Friend murine leukemia virus 1 1 1
Human herpesvirus 4 3 11
Human herpesvirus 4 type 1 3 11
Human herpesvirus 5 1
Human herpesvirus 6B 8
Human herpesvirus 7 2
Human immunodeficiency virus 1 1 1 1 2 1
Human papillomavirus type 129 2
Human papillomavirus type 49 1
Human papillomavirus type 50 2
Human papillomavirus type 70 2
Human papillomavirus type 96 2
Influenza A virus (A/New York/392/2004(H3N2)) segment 4 1 1
Kakugo virus 2
Maruca vitrata MNPV 1
Moloney murine leukemia virus 1 1 2 2
Moloney murine sarcoma virus 1 2 2
Murine astrovirus 1
Murine osteosarcoma virus 1 1 1 2 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 2 1 1 4 2 1 1 1 1 1 1 1 2 1 2 1 1 2 1 1 1 2 1 1 1 2 3 1 1 1 1 1 1 1 1 5 1 1 1 1 3
Murine type C retrovirus 1 2 2
Pestivirus Giraffe-1 1 1 1 1 1 1 1 1 2 1 2 1 2 1 1 1 1 2 1 1 1 1 1 1 1
Plutella xylostella multiple nucleopolyhedrovirus 2 2 2
PreXMRV-1 provirus 2
Rachiplusia ou MNPV 1 1 1
Rauscher murine leukemia virus 1 2 1 1
Shamonda virus segment S 1 3 1 1 1 1 1 4 5 1 1 2 3 4 3 1 2 1 1 3 4 1 2 2 2 1 11 1 2 1 2 1 1 2 1 3 3 2 2 2 1 3 1 2 5 1 2 8 2 2 5 3 1 2 1 2 3 2 1 1 1 2 2 1 1 1 1 2 3 48 1 1 1 1 1 3 1 1 1 1 3 2 2 2 1 1 1 1 1 3 1 1 4 2 3 7 20 1 6 2 13 2 1 2 1 2 4 3 2 1 2 6 1 1 2 1 3
Simian virus 40 2 1 1
Tobacco mild green mosaic virus 4
Tomato ringspot virus RNA 1 1 11
Tomato ringspot virus RNA 2 1 11
Woodchuck hepatitis virus 1 3 2
Woolly monkey sarcoma virus 1 1 1 1 1 1



Inquiries can be addressed to erik.larsson@gu.se