MtDNA deletions/duplications tool
In collaboration with the Maria Falkenberg lab and several other labs, we have developed a new tool, MitoSAlt, for detecting structural alterations in mitochondrial DNA using high throughput sequencing. MitoSAlt is currently the only method that can discriminate between deletions and duplications in mtDNA using short read sequencing.
The paper is finally out in PLoS Genetics.
Congratulations to Swaraj, Xie, Jennifer and everyone else!